6. VisualizationÂ
Graph networks of residue-residue contacts overlaid with G shifts.
Mutation tree maps, showing convergence/divergence clusters.
3D structure overlays (WT vs. V199), highlighting active site reshaping.
Trajectory heatmaps, mapping G_folding vs. G_binding evolution.
7. Significance
Even in a dummy, synthetic context, the simulation:
Reproduces known mutation benefits in PETase (validating framework)
Suggests novel candidates (e.g., G116S) worth in vitro validation
Demonstrates the scalability and nuance of the CAS-based engine
Lays groundwork for more advanced AI-in-the-loop, data-augmented evolutionary design